Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC23.55■■□□□ 1.36
ABCA3Q99758 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC23.55■■□□□ 1.36
ABCA3Q99758 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
ABCA3Q99758 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC23.55■■□□□ 1.36
ABCA3Q99758 AC025678.2-201ENST00000562061 970 ntBASIC23.55■■□□□ 1.36
ABCA3Q99758 AP001059.3-201ENST00000619053 235 ntBASIC23.55■■□□□ 1.36
ABCA3Q99758 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
ABCA3Q99758 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.55■■□□□ 1.36
ABCA3Q99758 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
ABCA3Q99758 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC23.54■■□□□ 1.36
ABCA3Q99758 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.54■■□□□ 1.36
ABCA3Q99758 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.54■■□□□ 1.36
ABCA3Q99758 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23.54■■□□□ 1.36
ABCA3Q99758 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.54■■□□□ 1.36
ABCA3Q99758 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC23.54■■□□□ 1.36
ABCA3Q99758 CLDN5-201ENST00000403084 2357 ntBASIC23.54■■□□□ 1.36
ABCA3Q99758 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.54■■□□□ 1.36
ABCA3Q99758 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.54■■□□□ 1.36
ABCA3Q99758 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ABCA3Q99758 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
ABCA3Q99758 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.53■■□□□ 1.36
ABCA3Q99758 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
ABCA3Q99758 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.53■■□□□ 1.36
ABCA3Q99758 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC23.53■■□□□ 1.36
ABCA3Q99758 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC23.53■■□□□ 1.36
ABCA3Q99758 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC23.53■■□□□ 1.36
ABCA3Q99758 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
ABCA3Q99758 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC23.53■■□□□ 1.36
ABCA3Q99758 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.53■■□□□ 1.36
ABCA3Q99758 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC23.53■■□□□ 1.36
ABCA3Q99758 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC23.53■■□□□ 1.36
ABCA3Q99758 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.53■■□□□ 1.36
ABCA3Q99758 AL513480.1-201ENST00000451731 511 ntBASIC23.53■■□□□ 1.36
ABCA3Q99758 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.53■■□□□ 1.36
ABCA3Q99758 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
ABCA3Q99758 DUX4L27-201ENST00000554796 1261 ntBASIC23.53■■□□□ 1.36
ABCA3Q99758 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
ABCA3Q99758 REXO1L3P-201ENST00000622202 1288 ntBASIC23.53■■□□□ 1.36
ABCA3Q99758 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.53■■□□□ 1.36
ABCA3Q99758 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ABCA3Q99758 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.52■■□□□ 1.36
ABCA3Q99758 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.52■■□□□ 1.36
ABCA3Q99758 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
ABCA3Q99758 AC097637.2-201ENST00000624096 1997 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 HLA-DRB6-201ENST00000411500 1235 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 LINC00982-205ENST00000420957 435 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 SPDYE11-202ENST00000450699 704 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC23.52■■□□□ 1.36
ABCA3Q99758 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.52■■□□□ 1.36
ABCA3Q99758 AL135744.1-201ENST00000565098 629 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 SPDYE9P-201ENST00000570642 692 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 SPDYE10P-202ENST00000612005 668 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 SPDYE8P-202ENST00000612377 668 ntBASIC23.52■■□□□ 1.36
ABCA3Q99758 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC23.52■■□□□ 1.36
ABCA3Q99758 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
ABCA3Q99758 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ABCA3Q99758 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
ABCA3Q99758 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.35
ABCA3Q99758 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.52■■□□□ 1.35
ABCA3Q99758 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ABCA3Q99758 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ABCA3Q99758 CNN2P2-201ENST00000443536 909 ntBASIC23.51■■□□□ 1.35
ABCA3Q99758 CNN2P3-201ENST00000450201 906 ntBASIC23.51■■□□□ 1.35
ABCA3Q99758 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC23.51■■□□□ 1.35
ABCA3Q99758 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC23.51■■□□□ 1.35
ABCA3Q99758 AL136317.3-201ENST00000618497 906 ntBASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms