Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL023284.2-201ENST00000405850 579 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 GATS-209ENST00000454084 1030 ntTSL 3 BASIC11.88□□□□□ -0.51
LITAFQ99732 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC11.88□□□□□ -0.51
LITAFQ99732 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 OR2A1-AS1-207ENST00000486094 819 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 AC091874.3-201ENST00000512672 1195 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC11.88□□□□□ -0.51
LITAFQ99732 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.88□□□□□ -0.51
LITAFQ99732 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 AC105036.2-201ENST00000569468 176 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 VPS53-216ENST00000574029 585 ntTSL 4 BASIC11.88□□□□□ -0.51
LITAFQ99732 AC008687.6-201ENST00000596318 630 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC11.88□□□□□ -0.51
LITAFQ99732 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC11.88□□□□□ -0.51
LITAFQ99732 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.88□□□□□ -0.51
LITAFQ99732 AC046185.3-201ENST00000623228 1824 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LITAFQ99732 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LITAFQ99732 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LITAFQ99732 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LITAFQ99732 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC11.87□□□□□ -0.51
LITAFQ99732 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC11.87□□□□□ -0.51
LITAFQ99732 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC11.87□□□□□ -0.51
LITAFQ99732 AC091390.4-202ENST00000476426 537 ntBASIC11.87□□□□□ -0.51
LITAFQ99732 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 AF201337.1-201ENST00000520239 748 ntBASIC11.87□□□□□ -0.51
LITAFQ99732 CKBP1-201ENST00000565489 1086 ntBASIC11.87□□□□□ -0.51
LITAFQ99732 AC004264.1-201ENST00000608354 794 ntBASIC11.87□□□□□ -0.51
LITAFQ99732 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.87□□□□□ -0.51
LITAFQ99732 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC11.87□□□□□ -0.51
LITAFQ99732 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LITAFQ99732 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.87□□□□□ -0.51
LITAFQ99732 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LITAFQ99732 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LITAFQ99732 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC11.86□□□□□ -0.51
LITAFQ99732 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC11.86□□□□□ -0.51
LITAFQ99732 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LITAFQ99732 AC024909.3-201ENST00000611513 2257 ntBASIC11.86□□□□□ -0.51
LITAFQ99732 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LITAFQ99732 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LITAFQ99732 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LITAFQ99732 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LITAFQ99732 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LITAFQ99732 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.86□□□□□ -0.51
LITAFQ99732 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LITAFQ99732 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms