Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
S1PR3Q99500 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.76□□□□□ -0.05
S1PR3Q99500 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.76□□□□□ -0.05
S1PR3Q99500 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.76□□□□□ -0.05
S1PR3Q99500 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.76□□□□□ -0.05
S1PR3Q99500 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.76□□□□□ -0.05
S1PR3Q99500 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
S1PR3Q99500 AC139887.4-201ENST00000607877 719 ntBASIC14.76□□□□□ -0.05
S1PR3Q99500 AL023973.1-201ENST00000624619 620 ntBASIC14.76□□□□□ -0.05
S1PR3Q99500 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.76□□□□□ -0.05
S1PR3Q99500 AL157888.1-201ENST00000631930 593 ntBASIC14.76□□□□□ -0.05
S1PR3Q99500 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
S1PR3Q99500 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
S1PR3Q99500 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.76□□□□□ -0.05
S1PR3Q99500 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.76□□□□□ -0.05
S1PR3Q99500 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
S1PR3Q99500 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
S1PR3Q99500 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
S1PR3Q99500 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.75□□□□□ -0.05
S1PR3Q99500 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
S1PR3Q99500 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
S1PR3Q99500 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
S1PR3Q99500 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.75□□□□□ -0.05
S1PR3Q99500 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.75□□□□□ -0.05
S1PR3Q99500 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.75□□□□□ -0.05
S1PR3Q99500 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 DUTP2-201ENST00000519164 463 ntBASIC14.75□□□□□ -0.05
S1PR3Q99500 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.75□□□□□ -0.05
S1PR3Q99500 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.75□□□□□ -0.05
S1PR3Q99500 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.75□□□□□ -0.05
S1PR3Q99500 RN7SL850P-201ENST00000579959 291 ntBASIC14.75□□□□□ -0.05
S1PR3Q99500 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.75□□□□□ -0.05
S1PR3Q99500 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
S1PR3Q99500 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.75□□□□□ -0.05
S1PR3Q99500 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
S1PR3Q99500 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
S1PR3Q99500 AC012317.2-201ENST00000623305 2251 ntBASIC14.75□□□□□ -0.05
S1PR3Q99500 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
S1PR3Q99500 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
S1PR3Q99500 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
S1PR3Q99500 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.74□□□□□ -0.05
S1PR3Q99500 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
S1PR3Q99500 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.74□□□□□ -0.05
S1PR3Q99500 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
S1PR3Q99500 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
S1PR3Q99500 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms