Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 AC004911.1-201ENST00000416316 871 ntBASIC16.82■□□□□ 0.28
NR1H4Q96RI1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 OR10C1-204ENST00000622521 1039 ntBASIC16.82■□□□□ 0.28
NR1H4Q96RI1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NR1H4Q96RI1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 AC093787.1-201ENST00000450396 207 ntBASIC16.81■□□□□ 0.28
NR1H4Q96RI1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 AC005181.1-201ENST00000604782 1256 ntBASIC16.81■□□□□ 0.28
NR1H4Q96RI1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H4Q96RI1 KRT17P1-201ENST00000399211 1546 ntBASIC16.8■□□□□ 0.28
NR1H4Q96RI1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 AC092437.1-201ENST00000624794 1048 ntBASIC16.8■□□□□ 0.28
NR1H4Q96RI1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 AC099063.4-201ENST00000641099 1602 ntBASIC16.8■□□□□ 0.28
NR1H4Q96RI1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H4Q96RI1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms