Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC125634.1-201ENST00000438758 1403 ntBASIC14.84□□□□□ -0.03
GAFA1Q96PS6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.84□□□□□ -0.03
GAFA1Q96PS6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 AP000867.3-201ENST00000524675 377 ntBASIC14.84□□□□□ -0.03
GAFA1Q96PS6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 AL138831.2-201ENST00000606564 490 ntBASIC14.84□□□□□ -0.03
GAFA1Q96PS6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 GNAS-203ENST00000306120 1878 ntBASIC14.84□□□□□ -0.03
GAFA1Q96PS6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 AC134043.2-201ENST00000624206 2238 ntBASIC14.84□□□□□ -0.03
GAFA1Q96PS6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GAFA1Q96PS6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 KRT17P6-201ENST00000453795 1220 ntBASIC14.83□□□□□ -0.04
GAFA1Q96PS6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 AC074051.2-201ENST00000565115 352 ntBASIC14.83□□□□□ -0.04
GAFA1Q96PS6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 AC097374.2-201ENST00000618617 1306 ntBASIC14.83□□□□□ -0.04
GAFA1Q96PS6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
GAFA1Q96PS6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 HCG4P8-203ENST00000443049 980 ntBASIC14.82□□□□□ -0.04
GAFA1Q96PS6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
GAFA1Q96PS6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms