Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 HMGN1P19-201ENST00000436976 333 ntBASIC23.38■■□□□ 1.33
NBPF4Q96M43 IGHV3-65-201ENST00000523210 341 ntBASIC23.38■■□□□ 1.33
NBPF4Q96M43 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NBPF4Q96M43 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
NBPF4Q96M43 WIZP1-201ENST00000531444 2299 ntBASIC23.38■■□□□ 1.33
NBPF4Q96M43 AP000974.1-201ENST00000623909 2387 ntBASIC23.37■■□□□ 1.33
NBPF4Q96M43 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 POR-209ENST00000439269 1858 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 NCF1C-201ENST00000438382 1427 ntBASIC23.37■■□□□ 1.33
NBPF4Q96M43 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 HCG4B-203ENST00000450128 991 ntBASIC23.37■■□□□ 1.33
NBPF4Q96M43 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 AC109462.3-201ENST00000573934 613 ntBASIC23.37■■□□□ 1.33
NBPF4Q96M43 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 AC018445.3-201ENST00000624177 1945 ntBASIC23.37■■□□□ 1.33
NBPF4Q96M43 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NBPF4Q96M43 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC23.37■■□□□ 1.33
NBPF4Q96M43 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 AC009949.1-201ENST00000623048 1830 ntBASIC23.36■■□□□ 1.33
NBPF4Q96M43 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 KLF4P1-201ENST00000412782 1185 ntBASIC23.36■■□□□ 1.33
NBPF4Q96M43 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 RPS15P9-201ENST00000494093 319 ntBASIC23.36■■□□□ 1.33
NBPF4Q96M43 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 AC018845.2-201ENST00000568326 409 ntBASIC23.36■■□□□ 1.33
NBPF4Q96M43 AC027796.2-201ENST00000575326 344 ntBASIC23.36■■□□□ 1.33
NBPF4Q96M43 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 AC008667.4-201ENST00000607370 168 ntBASIC23.36■■□□□ 1.33
NBPF4Q96M43 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NBPF4Q96M43 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
NBPF4Q96M43 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF4Q96M43 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF4Q96M43 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
NBPF4Q96M43 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF4Q96M43 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF4Q96M43 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF4Q96M43 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
NBPF4Q96M43 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NBPF4Q96M43 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
NBPF4Q96M43 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.35■■□□□ 1.33
NBPF4Q96M43 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
NBPF4Q96M43 CRYGEP-201ENST00000412192 528 ntBASIC23.35■■□□□ 1.33
NBPF4Q96M43 VN2R19P-201ENST00000442399 1052 ntBASIC23.35■■□□□ 1.33
NBPF4Q96M43 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.35■■□□□ 1.33
NBPF4Q96M43 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.35■■□□□ 1.33
NBPF4Q96M43 ALG1L5P-201ENST00000482043 771 ntBASIC23.35■■□□□ 1.33
NBPF4Q96M43 AL355385.1-201ENST00000606123 409 ntBASIC23.35■■□□□ 1.33
NBPF4Q96M43 AC004790.2-201ENST00000623588 572 ntBASIC23.35■■□□□ 1.33
NBPF4Q96M43 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms