Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 GUSBP12-201ENST00000513727 720 ntBASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 PP12613-201ENST00000424958 2230 ntBASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM5Q96HC4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 FZD10-202ENST00000539839 3282 ntBASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM5Q96HC4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AC139713.2-201ENST00000641328 2723 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 COX5BP2-201ENST00000392354 334 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AL031133.1-201ENST00000406807 723 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 TSPY22P-201ENST00000427496 604 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AC090616.6-201ENST00000582640 721 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AC011498.5-201ENST00000592027 486 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AL121956.5-201ENST00000625261 221 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 AC141586.5-201ENST00000624546 2050 ntBASIC17.4■□□□□ 0.38
PDLIM5Q96HC4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.39■□□□□ 0.38
PDLIM5Q96HC4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDLIM5Q96HC4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms