Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 LINC01711-201ENST00000598340 967 ntBASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 AL691432.3-201ENST00000621860 400 ntBASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.83■□□□□ 0.44
ECHDC3Q96DC8 BX276092.7-203ENST00000637198 1536 ntBASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 AC132008.2-207ENST00000454517 770 ntBASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ECHDC3Q96DC8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ECHDC3Q96DC8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 AC006116.8-202ENST00000587620 1550 ntBASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 SAPCD2P3-201ENST00000455031 850 ntBASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 EMBP1-201ENST00000458200 901 ntBASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 AC106795.1-205ENST00000512851 1056 ntBASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.8■□□□□ 0.44
ECHDC3Q96DC8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms