Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HPS3Q969F9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
HPS3Q969F9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.78■□□□□ 0.76
HPS3Q969F9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.78■□□□□ 0.76
HPS3Q969F9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.78■□□□□ 0.76
HPS3Q969F9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.78■□□□□ 0.76
HPS3Q969F9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.78■□□□□ 0.76
HPS3Q969F9 AC087388.1-201ENST00000571370 1112 ntBASIC19.78■□□□□ 0.76
HPS3Q969F9 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.78■□□□□ 0.76
HPS3Q969F9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HPS3Q969F9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS3Q969F9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
HPS3Q969F9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HPS3Q969F9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.77■□□□□ 0.76
HPS3Q969F9 KRT18P35-201ENST00000510488 1269 ntBASIC19.77■□□□□ 0.76
HPS3Q969F9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.77■□□□□ 0.76
HPS3Q969F9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS3Q969F9 AL121956.5-201ENST00000625261 221 ntBASIC19.77■□□□□ 0.76
HPS3Q969F9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HPS3Q969F9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HPS3Q969F9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HPS3Q969F9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 AC012313.1-201ENST00000593393 3059 ntBASIC19.76■□□□□ 0.75
HPS3Q969F9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.76■□□□□ 0.75
HPS3Q969F9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 AL845331.1-201ENST00000424978 1190 ntBASIC19.76■□□□□ 0.75
HPS3Q969F9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HPS3Q969F9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.76■□□□□ 0.75
HPS3Q969F9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS3Q969F9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HPS3Q969F9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.75■□□□□ 0.75
HPS3Q969F9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HPS3Q969F9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HPS3Q969F9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HPS3Q969F9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.75■□□□□ 0.75
HPS3Q969F9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.75■□□□□ 0.75
HPS3Q969F9 AL590326.2-201ENST00000625139 305 ntBASIC19.75■□□□□ 0.75
HPS3Q969F9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.75■□□□□ 0.75
HPS3Q969F9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HPS3Q969F9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
HPS3Q969F9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.75■□□□□ 0.75
HPS3Q969F9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HPS3Q969F9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
HPS3Q969F9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HPS3Q969F9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HPS3Q969F9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.74■□□□□ 0.75
HPS3Q969F9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.74■□□□□ 0.75
HPS3Q969F9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS3Q969F9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.74■□□□□ 0.75
HPS3Q969F9 AC141586.5-201ENST00000624546 2050 ntBASIC19.74■□□□□ 0.75
HPS3Q969F9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.74■□□□□ 0.75
HPS3Q969F9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS3Q969F9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HPS3Q969F9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms