Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RAPGEF4Q8WZA2 CROCCP3-202ENST00000420820 1947 ntBASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 VN2R19P-201ENST00000442399 1052 ntBASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 RPS15P9-201ENST00000494093 319 ntBASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAPGEF4Q8WZA2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.27■■□□□ 1.31
RAPGEF4Q8WZA2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.27■■□□□ 1.31
RAPGEF4Q8WZA2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 IGHV3-65-201ENST00000523210 341 ntBASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 AC008667.4-201ENST00000607370 168 ntBASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 AC019129.2-201ENST00000609837 1235 ntBASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 AC092865.6-201ENST00000642101 219 ntBASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 AL096828.2-201ENST00000567259 1965 ntBASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RAPGEF4Q8WZA2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 AL596442.2-201ENST00000610240 980 ntBASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RAPGEF4Q8WZA2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 PRSS29P-201ENST00000440800 595 ntBASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 HCG4B-203ENST00000450128 991 ntBASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 YBX1P5-201ENST00000509441 847 ntBASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 AC018845.2-201ENST00000568326 409 ntBASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 AC109462.3-201ENST00000573934 613 ntBASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms