Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 KRT8P47-201ENST00000604727 1398 ntBASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 RBM17P1-201ENST00000453646 1190 ntBASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 TNRC18P3-201ENST00000441896 2691 ntBASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RPS4Y2Q8TD47 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 AC016396.2-201ENST00000562575 1417 ntBASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 PVRIG2P-201ENST00000435460 978 ntBASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 FITM1-202ENST00000559294 800 ntBASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 MIR3917-201ENST00000580971 93 ntBASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 AC116562.4-202ENST00000641738 218 ntBASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPS4Y2Q8TD47 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 AGGF1P2-201ENST00000426656 2106 ntBASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 AC005104.2-201ENST00000427818 678 ntBASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPS4Y2Q8TD47 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms