Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 VENTXP7-201ENST00000475503 772 ntBASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 AC011840.4-201ENST00000578471 627 ntBASIC19.43■□□□□ 0.7
LNX1Q8TBB1 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LNX1Q8TBB1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 AC113404.2-201ENST00000507884 177 ntBASIC19.42■□□□□ 0.7
LNX1Q8TBB1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.42■□□□□ 0.7
LNX1Q8TBB1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 AC006116.8-202ENST00000587620 1550 ntBASIC19.41■□□□□ 0.7
LNX1Q8TBB1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 KRT16P4-201ENST00000453883 522 ntBASIC19.41■□□□□ 0.7
LNX1Q8TBB1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.41■□□□□ 0.7
LNX1Q8TBB1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
LNX1Q8TBB1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms