Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.67■□□□□ 0.42
RFWD2Q8NHY2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 ABHD17AP1-201ENST00000358206 933 ntBASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 AC011506.1-201ENST00000474329 610 ntBASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFWD2Q8NHY2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 KSR1P1-201ENST00000446298 240 ntBASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 AP002982.1-201ENST00000492365 877 ntBASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 AL024508.2-201ENST00000607749 1894 ntBASIC17.65■□□□□ 0.42
RFWD2Q8NHY2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFWD2Q8NHY2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFWD2Q8NHY2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.64■□□□□ 0.42
RFWD2Q8NHY2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFWD2Q8NHY2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.64■□□□□ 0.41
RFWD2Q8NHY2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms