Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.57■□□□□ 0.24
BEST3Q8N1M1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 AP002469.2-201ENST00000531724 424 ntBASIC16.57■□□□□ 0.24
BEST3Q8N1M1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
BEST3Q8N1M1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 RCN1P2-201ENST00000398357 915 ntBASIC16.56■□□□□ 0.24
BEST3Q8N1M1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 AF238378.1-201ENST00000526806 358 ntBASIC16.56■□□□□ 0.24
BEST3Q8N1M1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 AC020916.1-201ENST00000587762 1774 ntBASIC16.56■□□□□ 0.24
BEST3Q8N1M1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
BEST3Q8N1M1 PKD1P1-201ENST00000458669 6805 ntBASIC16.56■□□□□ 0.24
BEST3Q8N1M1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 AC104581.1-202ENST00000635932 2618 ntBASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.55■□□□□ 0.24
BEST3Q8N1M1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BEST3Q8N1M1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
BEST3Q8N1M1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.54■□□□□ 0.24
BEST3Q8N1M1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST3Q8N1M1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST3Q8N1M1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST3Q8N1M1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BEST3Q8N1M1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms