Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 AL645939.2-201ENST00000427340 991 ntBASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 SIGLEC30P-201ENST00000455569 941 ntBASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.67■□□□□ 0.26
COL27A1Q8IZC6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.66■□□□□ 0.26
COL27A1Q8IZC6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 CEND1P1-201ENST00000451006 455 ntBASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 AC087163.2-201ENST00000457299 853 ntBASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 AP002472.1-201ENST00000577490 586 ntBASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.65■□□□□ 0.26
COL27A1Q8IZC6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 AL035633.1-201ENST00000406139 838 ntBASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 FAM58CP-201ENST00000435741 640 ntBASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 GGTLC5P-201ENST00000617623 998 ntBASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 AC093028.1-201ENST00000622998 982 ntBASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
COL27A1Q8IZC6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL27A1Q8IZC6 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms