Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 Z99916.2-201ENST00000604037 246 ntBASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 AC099343.3-201ENST00000605834 2503 ntBASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM42Q8IWZ5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 FER1L4-210ENST00000615531 5998 ntBASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 FSCN1P1-201ENST00000568912 1481 ntBASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM42Q8IWZ5 AC022898.2-201ENST00000616822 1312 ntBASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 AL118508.1-201ENST00000613502 2345 ntBASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM42Q8IWZ5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 AC073195.1-201ENST00000607241 877 ntBASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.82■□□□□ 0.44
TRIM42Q8IWZ5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 AC096733.2-201ENST00000609937 1394 ntBASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 HLA-J-201ENST00000462773 1622 ntBASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM42Q8IWZ5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms