Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC50Q8IVM0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 HMGA1P5-201ENST00000412453 271 ntBASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 FAM87A-204ENST00000613235 858 ntBASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 AC092865.7-201ENST00000641832 219 ntBASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC50Q8IVM0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC50Q8IVM0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC50Q8IVM0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms