Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC71Q8IV32 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 GPAT2P1-201ENST00000444924 1672 ntBASIC16.75■□□□□ 0.27
CCDC71Q8IV32 AP001094.4-201ENST00000579008 2176 ntBASIC16.75■□□□□ 0.27
CCDC71Q8IV32 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 AC092597.1-201ENST00000487352 616 ntBASIC16.75■□□□□ 0.27
CCDC71Q8IV32 AC012313.10-201ENST00000623509 926 ntBASIC16.75■□□□□ 0.27
CCDC71Q8IV32 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC71Q8IV32 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 SPDYE13P-201ENST00000445314 798 ntBASIC16.74■□□□□ 0.27
CCDC71Q8IV32 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 AC024243.1-201ENST00000609234 778 ntBASIC16.74■□□□□ 0.27
CCDC71Q8IV32 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 NKILA-202ENST00000614771 2598 ntBASIC16.74■□□□□ 0.27
CCDC71Q8IV32 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC71Q8IV32 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 AC011676.5-201ENST00000624864 2660 ntBASIC16.73■□□□□ 0.27
CCDC71Q8IV32 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC71Q8IV32 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms