Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.04■□□□□ 0.64
NPAS4Q8IUM7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPAS4Q8IUM7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 HMGN1P19-201ENST00000436976 333 ntBASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 PRSS29P-201ENST00000440800 595 ntBASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 AC027796.2-201ENST00000575326 344 ntBASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 AC019129.2-201ENST00000609837 1235 ntBASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NPAS4Q8IUM7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 HCG4B-203ENST00000450128 991 ntBASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 AC116407.2-201ENST00000613639 860 ntBASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 AL096828.2-201ENST00000567259 1965 ntBASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS4Q8IUM7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS4Q8IUM7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS4Q8IUM7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS4Q8IUM7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.02■□□□□ 0.63
NPAS4Q8IUM7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS4Q8IUM7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS4Q8IUM7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 YBX1P5-201ENST00000509441 847 ntBASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS4Q8IUM7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 AC018445.3-201ENST00000624177 1945 ntBASIC19■□□□□ 0.63
NPAS4Q8IUM7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms