Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 AL157888.1-201ENST00000631930 593 ntBASIC11.83□□□□□ -0.52
SCXQ7RTU7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC11.83□□□□□ -0.52
SCXQ7RTU7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SCXQ7RTU7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC126755.1-201ENST00000525846 6405 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC063926.3-201ENST00000624734 5658 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AL109659.2-201ENST00000606809 1674 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AL512353.2-201ENST00000448759 1962 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 BX276092.5-203ENST00000456199 560 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 MIR3917-201ENST00000580971 93 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC011498.5-201ENST00000592027 486 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 AL136038.4-201ENST00000603606 1261 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AL691432.3-201ENST00000621860 400 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC012313.10-201ENST00000623509 926 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 WIZP1-201ENST00000531444 2299 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AC008556.1-201ENST00000610908 2040 ntBASIC11.82□□□□□ -0.52
SCXQ7RTU7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms