Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.91■□□□□ 0.94
USP50Q70EL3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP50Q70EL3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP50Q70EL3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP50Q70EL3 AC007952.6-201ENST00000573168 2673 ntBASIC20.91■□□□□ 0.94
USP50Q70EL3 AC003957.1-201ENST00000625108 2673 ntBASIC20.91■□□□□ 0.94
USP50Q70EL3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
USP50Q70EL3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.9■□□□□ 0.94
USP50Q70EL3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.9■□□□□ 0.94
USP50Q70EL3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP50Q70EL3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP50Q70EL3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
USP50Q70EL3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.9■□□□□ 0.94
USP50Q70EL3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
USP50Q70EL3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.9■□□□□ 0.94
USP50Q70EL3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
USP50Q70EL3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.9■□□□□ 0.94
USP50Q70EL3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 LINC00982-205ENST00000420957 435 ntBASIC20.9■□□□□ 0.94
USP50Q70EL3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.9■□□□□ 0.94
USP50Q70EL3 CNN2P2-201ENST00000443536 909 ntBASIC20.9■□□□□ 0.94
USP50Q70EL3 CNN2P3-201ENST00000450201 906 ntBASIC20.9■□□□□ 0.94
USP50Q70EL3 GAPDHP21-201ENST00000450301 1010 ntBASIC20.9■□□□□ 0.94
USP50Q70EL3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP50Q70EL3 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.9■□□□□ 0.94
USP50Q70EL3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.9■□□□□ 0.94
USP50Q70EL3 STK25P1-201ENST00000585406 838 ntBASIC20.9■□□□□ 0.94
USP50Q70EL3 AL136317.3-201ENST00000618497 906 ntBASIC20.9■□□□□ 0.94
USP50Q70EL3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.9■□□□□ 0.94
USP50Q70EL3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP50Q70EL3 AC092919.2-201ENST00000623631 1645 ntBASIC20.89■□□□□ 0.94
USP50Q70EL3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.89■□□□□ 0.94
USP50Q70EL3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.89■□□□□ 0.94
USP50Q70EL3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USP50Q70EL3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
USP50Q70EL3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.89■□□□□ 0.94
USP50Q70EL3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP50Q70EL3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.89■□□□□ 0.93
USP50Q70EL3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.89■□□□□ 0.93
USP50Q70EL3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
USP50Q70EL3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 FAM185BP-201ENST00000443595 716 ntBASIC20.89■□□□□ 0.93
USP50Q70EL3 TIMM8BP1-201ENST00000452384 211 ntBASIC20.89■□□□□ 0.93
USP50Q70EL3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.89■□□□□ 0.93
USP50Q70EL3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.89■□□□□ 0.93
USP50Q70EL3 AC051619.7-201ENST00000568314 623 ntBASIC20.89■□□□□ 0.93
USP50Q70EL3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.89■□□□□ 0.93
USP50Q70EL3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 RN7SL204P-201ENST00000582831 262 ntBASIC20.89■□□□□ 0.93
USP50Q70EL3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP50Q70EL3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.89■□□□□ 0.93
USP50Q70EL3 AC026120.1-201ENST00000611536 926 ntBASIC20.89■□□□□ 0.93
USP50Q70EL3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
USP50Q70EL3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
USP50Q70EL3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP50Q70EL3 PI4KAP1-204ENST00000612579 1703 ntBASIC20.89■□□□□ 0.93
USP50Q70EL3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
USP50Q70EL3 ESPNP-201ENST00000270691 2015 ntBASIC20.88■□□□□ 0.93
USP50Q70EL3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
USP50Q70EL3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.88■□□□□ 0.93
USP50Q70EL3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP50Q70EL3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.88■□□□□ 0.93
USP50Q70EL3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP50Q70EL3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP50Q70EL3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.88■□□□□ 0.93
USP50Q70EL3 TSPY16P-201ENST00000449843 468 ntBASIC20.88■□□□□ 0.93
USP50Q70EL3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP50Q70EL3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.88■□□□□ 0.93
USP50Q70EL3 AC109462.3-201ENST00000573934 613 ntBASIC20.88■□□□□ 0.93
USP50Q70EL3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.88■□□□□ 0.93
USP50Q70EL3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
USP50Q70EL3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP50Q70EL3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP50Q70EL3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP50Q70EL3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP50Q70EL3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.87■□□□□ 0.93
USP50Q70EL3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP50Q70EL3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
USP50Q70EL3 AC093010.1-201ENST00000473625 1624 ntBASIC20.87■□□□□ 0.93
USP50Q70EL3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.87■□□□□ 0.93
USP50Q70EL3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.87■□□□□ 0.93
USP50Q70EL3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP50Q70EL3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP50Q70EL3 AC002056.1-201ENST00000395613 760 ntBASIC20.87■□□□□ 0.93
USP50Q70EL3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms