Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 AC007967.3-201ENST00000434308 558 ntBASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 FAM197Y8-203ENST00000450145 560 ntBASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 FGFR3P6-201ENST00000457012 610 ntBASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 AP001269.4-201ENST00000609611 512 ntBASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 AC093677.2-201ENST00000600169 1863 ntBASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H3F3CQ6NXT2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 FAM220CP-201ENST00000395253 831 ntBASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 RNA5SP419-201ENST00000515908 135 ntBASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 MTDHP3-201ENST00000594186 672 ntBASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H3F3CQ6NXT2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 KRT18P67-201ENST00000432816 1264 ntBASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 KRT8P47-201ENST00000604727 1398 ntBASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
H3F3CQ6NXT2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
H3F3CQ6NXT2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
H3F3CQ6NXT2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
H3F3CQ6NXT2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.46■□□□□ 0.22
H3F3CQ6NXT2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms