Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13DQ5THJ4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 MIR4751-201ENST00000578027 74 ntBASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 AC093512.1-201ENST00000617969 520 ntBASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
VPS13DQ5THJ4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 AC244107.1-201ENST00000442033 332 ntBASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 AC004790.2-201ENST00000623588 572 ntBASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 AC025580.3-201ENST00000617932 1424 ntBASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 AC068137.2-201ENST00000605408 478 ntBASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13DQ5THJ4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 ACTG1P14-201ENST00000446382 1122 ntBASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 MRPL20P1-201ENST00000400819 433 ntBASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 AC097637.2-201ENST00000624096 1997 ntBASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 PTCHD3P3-201ENST00000403073 906 ntBASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 AC109462.3-201ENST00000573934 613 ntBASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13DQ5THJ4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms