Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRK2Q5S007 SPDYE11-202ENST00000450699 704 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 KRT8P48-201ENST00000515599 1220 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 SPDYE9P-201ENST00000570642 692 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 SPDYE10P-202ENST00000612005 668 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 SPDYE8P-202ENST00000612377 668 ntBASIC15.36■□□□□ 0.05
LRRK2Q5S007 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRK2Q5S007 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 AC009102.3-201ENST00000623118 1491 ntBASIC15.35■□□□□ 0.05
LRRK2Q5S007 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRK2Q5S007 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRK2Q5S007 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 AL499627.1-201ENST00000569373 2188 ntBASIC15.34■□□□□ 0.05
LRRK2Q5S007 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRK2Q5S007 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 AC002056.1-201ENST00000395613 760 ntBASIC15.34■□□□□ 0.05
LRRK2Q5S007 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.34■□□□□ 0.05
LRRK2Q5S007 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRRK2Q5S007 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 ACTL9-202ENST00000612068 1252 ntBASIC15.33■□□□□ 0.04
LRRK2Q5S007 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 AC018445.3-201ENST00000624177 1945 ntBASIC15.33■□□□□ 0.04
LRRK2Q5S007 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRK2Q5S007 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 FAM86C2P-203ENST00000528684 1004 ntBASIC15.33■□□□□ 0.04
LRRK2Q5S007 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 LINC01225-203ENST00000563550 1244 ntBASIC15.33■□□□□ 0.04
LRRK2Q5S007 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRK2Q5S007 AC009118.2-201ENST00000613275 655 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms