Protein–RNA interactions for Protein: Q5JSP0

FGD3, FYVE, RhoGEF and PH domain-containing protein 3, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3Q5JSP0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 MIR149-201ENST00000384879 89 ntBASIC16.79■□□□□ 0.28
FGD3Q5JSP0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 CD99P1-205ENST00000527459 561 ntBASIC16.79■□□□□ 0.28
FGD3Q5JSP0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 LINC00602-201ENST00000629776 2065 ntBASIC16.79■□□□□ 0.28
FGD3Q5JSP0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FGD3Q5JSP0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 AC097488.1-201ENST00000507834 756 ntBASIC16.78■□□□□ 0.28
FGD3Q5JSP0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 AL135905.2-201ENST00000584934 1404 ntBASIC16.78■□□□□ 0.28
FGD3Q5JSP0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
FGD3Q5JSP0 AL023806.1-201ENST00000603994 1649 ntBASIC16.78■□□□□ 0.28
FGD3Q5JSP0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.77■□□□□ 0.28
FGD3Q5JSP0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.77■□□□□ 0.28
FGD3Q5JSP0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FGD3Q5JSP0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms