Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LONRF3Q496Y0 AL355312.1-201ENST00000407115 2176 ntBASIC20.31■□□□□ 0.84
LONRF3Q496Y0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 AC108860.2-201ENST00000562760 2183 ntBASIC20.3■□□□□ 0.84
LONRF3Q496Y0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 KRT18P48-201ENST00000434763 852 ntBASIC20.3■□□□□ 0.84
LONRF3Q496Y0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 AC020916.1-201ENST00000587762 1774 ntBASIC20.3■□□□□ 0.84
LONRF3Q496Y0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 AC141586.5-201ENST00000624546 2050 ntBASIC20.3■□□□□ 0.84
LONRF3Q496Y0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LONRF3Q496Y0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 AC092119.3-201ENST00000612618 583 ntBASIC20.29■□□□□ 0.84
LONRF3Q496Y0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 LINC00602-201ENST00000629776 2065 ntBASIC20.29■□□□□ 0.84
LONRF3Q496Y0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LONRF3Q496Y0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 HTR7P1-202ENST00000624664 4411 ntBASIC20.28■□□□□ 0.84
LONRF3Q496Y0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 DUSP5P1-201ENST00000441325 1139 ntBASIC20.28■□□□□ 0.84
LONRF3Q496Y0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 CLEC4GP1-201ENST00000596555 870 ntBASIC20.28■□□□□ 0.84
LONRF3Q496Y0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LONRF3Q496Y0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.27■□□□□ 0.84
LONRF3Q496Y0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms