Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RFX4Q33E94 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.63■□□□□ 0.25
RFX4Q33E94 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RFX4Q33E94 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.63■□□□□ 0.25
RFX4Q33E94 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFX4Q33E94 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RFX4Q33E94 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFX4Q33E94 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
RFX4Q33E94 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 AC097488.1-201ENST00000507834 756 ntBASIC16.62■□□□□ 0.25
RFX4Q33E94 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.62■□□□□ 0.25
RFX4Q33E94 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RFX4Q33E94 ITM2C-210ENST00000620962 501 ntBASIC16.62■□□□□ 0.25
RFX4Q33E94 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.62■□□□□ 0.25
RFX4Q33E94 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFX4Q33E94 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
RFX4Q33E94 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.62■□□□□ 0.25
RFX4Q33E94 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFX4Q33E94 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX4Q33E94 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX4Q33E94 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RFX4Q33E94 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.61■□□□□ 0.25
RFX4Q33E94 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 KRT18P29-201ENST00000397031 1267 ntBASIC16.61■□□□□ 0.25
RFX4Q33E94 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.61■□□□□ 0.25
RFX4Q33E94 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.61■□□□□ 0.25
RFX4Q33E94 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.61■□□□□ 0.25
RFX4Q33E94 MIR3180-5-201ENST00000583743 153 ntBASIC16.61■□□□□ 0.25
RFX4Q33E94 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.61■□□□□ 0.25
RFX4Q33E94 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.61■□□□□ 0.25
RFX4Q33E94 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RFX4Q33E94 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RFX4Q33E94 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.61■□□□□ 0.25
RFX4Q33E94 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.61■□□□□ 0.25
RFX4Q33E94 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RFX4Q33E94 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RFX4Q33E94 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RFX4Q33E94 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFX4Q33E94 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RFX4Q33E94 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 HLA-J-201ENST00000462773 1622 ntBASIC16.6■□□□□ 0.25
RFX4Q33E94 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX4Q33E94 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX4Q33E94 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.6■□□□□ 0.25
RFX4Q33E94 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX4Q33E94 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.6■□□□□ 0.25
RFX4Q33E94 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.6■□□□□ 0.25
RFX4Q33E94 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RFX4Q33E94 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RFX4Q33E94 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.6■□□□□ 0.25
RFX4Q33E94 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms