Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSRP1Q08945 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.72■□□□□ 0.91
SSRP1Q08945 AC090616.6-201ENST00000582640 721 ntBASIC20.72■□□□□ 0.91
SSRP1Q08945 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.72■□□□□ 0.91
SSRP1Q08945 AL121672.3-201ENST00000608644 468 ntBASIC20.72■□□□□ 0.91
SSRP1Q08945 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSRP1Q08945 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SSRP1Q08945 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSRP1Q08945 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSRP1Q08945 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SSRP1Q08945 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SSRP1Q08945 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.72■□□□□ 0.91
SSRP1Q08945 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.72■□□□□ 0.91
SSRP1Q08945 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSRP1Q08945 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSRP1Q08945 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SSRP1Q08945 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SSRP1Q08945 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SSRP1Q08945 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.71■□□□□ 0.91
SSRP1Q08945 AL592071.1-201ENST00000611956 408 ntBASIC20.71■□□□□ 0.91
SSRP1Q08945 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.71■□□□□ 0.91
SSRP1Q08945 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SSRP1Q08945 IER3-202ENST00000376377 1350 ntBASIC20.71■□□□□ 0.91
SSRP1Q08945 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSRP1Q08945 AC016734.2-201ENST00000624325 1377 ntBASIC20.71■□□□□ 0.91
SSRP1Q08945 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SSRP1Q08945 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.7■□□□□ 0.9
SSRP1Q08945 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.7■□□□□ 0.9
SSRP1Q08945 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SSRP1Q08945 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.7■□□□□ 0.9
SSRP1Q08945 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.7■□□□□ 0.9
SSRP1Q08945 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.7■□□□□ 0.9
SSRP1Q08945 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SSRP1Q08945 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.7■□□□□ 0.9
SSRP1Q08945 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.7■□□□□ 0.9
SSRP1Q08945 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSRP1Q08945 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.69■□□□□ 0.9
SSRP1Q08945 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SSRP1Q08945 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSRP1Q08945 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.69■□□□□ 0.9
SSRP1Q08945 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.69■□□□□ 0.9
SSRP1Q08945 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.69■□□□□ 0.9
SSRP1Q08945 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.69■□□□□ 0.9
SSRP1Q08945 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 DDX43P3-201ENST00000441064 443 ntBASIC20.69■□□□□ 0.9
SSRP1Q08945 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
SSRP1Q08945 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.69■□□□□ 0.9
SSRP1Q08945 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.69■□□□□ 0.9
SSRP1Q08945 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.69■□□□□ 0.9
SSRP1Q08945 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SSRP1Q08945 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SSRP1Q08945 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SSRP1Q08945 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SSRP1Q08945 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSRP1Q08945 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SSRP1Q08945 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SSRP1Q08945 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSRP1Q08945 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms