Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 AC009949.1-201ENST00000623048 1830 ntBASIC17.22■□□□□ 0.35
HMGCS1Q01581 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 AC113347.1-201ENST00000413321 391 ntBASIC17.22■□□□□ 0.35
HMGCS1Q01581 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCS1Q01581 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMGCS1Q01581 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 AC011558.1-201ENST00000623459 338 ntBASIC17.21■□□□□ 0.35
HMGCS1Q01581 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 AC080080.1-201ENST00000625121 2420 ntBASIC17.21■□□□□ 0.35
HMGCS1Q01581 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.21■□□□□ 0.35
HMGCS1Q01581 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCS1Q01581 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCS1Q01581 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HMGCS1Q01581 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.2■□□□□ 0.34
HMGCS1Q01581 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 TERF1P1-201ENST00000311003 1181 ntBASIC17.2■□□□□ 0.34
HMGCS1Q01581 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 AC139887.4-201ENST00000607877 719 ntBASIC17.2■□□□□ 0.34
HMGCS1Q01581 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HMGCS1Q01581 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.2■□□□□ 0.34
HMGCS1Q01581 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HMGCS1Q01581 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HMGCS1Q01581 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 PKD1P1-201ENST00000458669 6805 ntBASIC17.19■□□□□ 0.34
HMGCS1Q01581 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGCS1Q01581 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
HMGCS1Q01581 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGCS1Q01581 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms