Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HTRA3P83110 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTRA3P83110 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HTRA3P83110 FP475955.4-201ENST00000623131 1990 ntBASIC20.52■□□□□ 0.88
HTRA3P83110 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HTRA3P83110 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTRA3P83110 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTRA3P83110 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTRA3P83110 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.52■□□□□ 0.88
HTRA3P83110 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.52■□□□□ 0.88
HTRA3P83110 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HTRA3P83110 AC092933.1-201ENST00000393644 945 ntBASIC20.52■□□□□ 0.88
HTRA3P83110 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.52■□□□□ 0.88
HTRA3P83110 AC103564.2-201ENST00000432853 1299 ntBASIC20.52■□□□□ 0.88
HTRA3P83110 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.52■□□□□ 0.88
HTRA3P83110 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.52■□□□□ 0.88
HTRA3P83110 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.52■□□□□ 0.88
HTRA3P83110 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.52■□□□□ 0.88
HTRA3P83110 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.52■□□□□ 0.88
HTRA3P83110 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.52■□□□□ 0.88
HTRA3P83110 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTRA3P83110 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.52■□□□□ 0.88
HTRA3P83110 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTRA3P83110 AC100757.3-201ENST00000622361 1406 ntBASIC20.52■□□□□ 0.87
HTRA3P83110 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HTRA3P83110 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.51■□□□□ 0.87
HTRA3P83110 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.51■□□□□ 0.87
HTRA3P83110 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.51■□□□□ 0.87
HTRA3P83110 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.51■□□□□ 0.87
HTRA3P83110 RN7SL589P-201ENST00000481268 310 ntBASIC20.51■□□□□ 0.87
HTRA3P83110 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.51■□□□□ 0.87
HTRA3P83110 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.51■□□□□ 0.87
HTRA3P83110 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.51■□□□□ 0.87
HTRA3P83110 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.51■□□□□ 0.87
HTRA3P83110 AL590560.3-201ENST00000623350 461 ntBASIC20.51■□□□□ 0.87
HTRA3P83110 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HTRA3P83110 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.51■□□□□ 0.87
HTRA3P83110 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HTRA3P83110 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.51■□□□□ 0.87
HTRA3P83110 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
HTRA3P83110 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.51■□□□□ 0.87
HTRA3P83110 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
HTRA3P83110 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HTRA3P83110 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 DGCR5-201ENST00000399539 862 ntBASIC20.5■□□□□ 0.87
HTRA3P83110 KLF4P1-201ENST00000412782 1185 ntBASIC20.5■□□□□ 0.87
HTRA3P83110 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.5■□□□□ 0.87
HTRA3P83110 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HTRA3P83110 AC027369.6-201ENST00000525520 931 ntBASIC20.5■□□□□ 0.87
HTRA3P83110 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.5■□□□□ 0.87
HTRA3P83110 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.5■□□□□ 0.87
HTRA3P83110 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.5■□□□□ 0.87
HTRA3P83110 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HTRA3P83110 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.5■□□□□ 0.87
HTRA3P83110 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
HTRA3P83110 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 AC022144.1-201ENST00000602255 1580 ntBASIC20.5■□□□□ 0.87
HTRA3P83110 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTRA3P83110 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTRA3P83110 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HTRA3P83110 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTRA3P83110 AC097637.2-201ENST00000624096 1997 ntBASIC20.49■□□□□ 0.87
HTRA3P83110 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HTRA3P83110 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
HTRA3P83110 ELK2AP-201ENST00000392510 1007 ntBASIC20.49■□□□□ 0.87
HTRA3P83110 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTRA3P83110 AL512384.1-201ENST00000406683 331 ntBASIC20.49■□□□□ 0.87
HTRA3P83110 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.49■□□□□ 0.87
HTRA3P83110 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HTRA3P83110 API5-211ENST00000534695 560 ntTSL 5 BASIC20.49■□□□□ 0.87
HTRA3P83110 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTRA3P83110 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.49■□□□□ 0.87
HTRA3P83110 KRT8P23-201ENST00000560090 1207 ntBASIC20.49■□□□□ 0.87
HTRA3P83110 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
HTRA3P83110 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.49■□□□□ 0.87
HTRA3P83110 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.49■□□□□ 0.87
HTRA3P83110 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.49■□□□□ 0.87
HTRA3P83110 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTRA3P83110 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HTRA3P83110 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
HTRA3P83110 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTRA3P83110 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.49■□□□□ 0.87
HTRA3P83110 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.49■□□□□ 0.87
HTRA3P83110 AC007541.1-201ENST00000570282 1469 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms