Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL20P78556 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CCL20P78556 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 MIR564-202ENST00000385049 94 ntBASIC14.07□□□□□ -0.16
CCL20P78556 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCL20P78556 BX276092.2-201ENST00000417668 665 ntBASIC14.07□□□□□ -0.16
CCL20P78556 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CCL20P78556 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL20P78556 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL20P78556 PRSS44-201ENST00000515154 1146 ntBASIC14.07□□□□□ -0.16
CCL20P78556 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 AC120498.8-201ENST00000614275 531 ntBASIC14.07□□□□□ -0.16
CCL20P78556 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL20P78556 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCL20P78556 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL20P78556 AC092068.3-201ENST00000587894 2016 ntBASIC14.07□□□□□ -0.16
CCL20P78556 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL20P78556 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 AC105917.1-201ENST00000506637 2539 ntBASIC14.06□□□□□ -0.16
CCL20P78556 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL20P78556 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.06□□□□□ -0.16
CCL20P78556 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL20P78556 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL20P78556 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCL20P78556 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CCL20P78556 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL20P78556 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CCL20P78556 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CCL20P78556 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 AC005052.1-201ENST00000625181 2492 ntBASIC14.05□□□□□ -0.16
CCL20P78556 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 AC116353.5-201ENST00000638148 1699 ntBASIC14.05□□□□□ -0.16
CCL20P78556 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCL20P78556 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCL20P78556 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL20P78556 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL20P78556 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL20P78556 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CCL20P78556 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL20P78556 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL20P78556 RNF216P1-203ENST00000404404 2427 ntBASIC14.05□□□□□ -0.16
CCL20P78556 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms