Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB38P57729 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB38P57729 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB38P57729 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB38P57729 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB38P57729 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB38P57729 MIR3652-201ENST00000579335 131 ntBASIC16.78■□□□□ 0.28
RAB38P57729 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.78■□□□□ 0.28
RAB38P57729 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB38P57729 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB38P57729 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB38P57729 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.78■□□□□ 0.28
RAB38P57729 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB38P57729 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAB38P57729 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB38P57729 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB38P57729 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RAB38P57729 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAB38P57729 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
RAB38P57729 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB38P57729 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RAB38P57729 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RAB38P57729 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAB38P57729 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.77■□□□□ 0.28
RAB38P57729 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.77■□□□□ 0.28
RAB38P57729 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB38P57729 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 AC099336.1-202ENST00000602961 463 ntBASIC16.77■□□□□ 0.28
RAB38P57729 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB38P57729 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
RAB38P57729 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB38P57729 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB38P57729 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RAB38P57729 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB38P57729 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.77■□□□□ 0.27
RAB38P57729 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB38P57729 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB38P57729 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB38P57729 AC006116.8-202ENST00000587620 1550 ntBASIC16.77■□□□□ 0.27
RAB38P57729 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB38P57729 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 BX276092.7-203ENST00000637198 1536 ntBASIC16.76■□□□□ 0.27
RAB38P57729 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
RAB38P57729 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB38P57729 AC007967.3-201ENST00000434308 558 ntBASIC16.76■□□□□ 0.27
RAB38P57729 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB38P57729 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB38P57729 BNIP3P18-201ENST00000593976 575 ntBASIC16.76■□□□□ 0.27
RAB38P57729 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB38P57729 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB38P57729 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 NOC2LP2-201ENST00000407594 1944 ntBASIC16.76■□□□□ 0.27
RAB38P57729 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB38P57729 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAB38P57729 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB38P57729 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB38P57729 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms