Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.55■□□□□ 0.24
PER3P56645 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PER3P56645 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.54■□□□□ 0.24
PER3P56645 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.54■□□□□ 0.24
PER3P56645 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.54■□□□□ 0.24
PER3P56645 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PER3P56645 AC093909.1-201ENST00000504731 1122 ntBASIC16.54■□□□□ 0.24
PER3P56645 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PER3P56645 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.54■□□□□ 0.24
PER3P56645 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.54■□□□□ 0.24
PER3P56645 AC005332.3-201ENST00000589904 676 ntBASIC16.54■□□□□ 0.24
PER3P56645 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.54■□□□□ 0.24
PER3P56645 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PER3P56645 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.54■□□□□ 0.24
PER3P56645 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PER3P56645 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 HOXB1-202ENST00000577092 1414 ntBASIC16.53■□□□□ 0.24
PER3P56645 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.53■□□□□ 0.24
PER3P56645 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.53■□□□□ 0.24
PER3P56645 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.53■□□□□ 0.24
PER3P56645 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.53■□□□□ 0.24
PER3P56645 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.53■□□□□ 0.24
PER3P56645 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.53■□□□□ 0.24
PER3P56645 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.53■□□□□ 0.24
PER3P56645 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.53■□□□□ 0.24
PER3P56645 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 GPR32P1-201ENST00000601788 811 ntBASIC16.53■□□□□ 0.24
PER3P56645 AL390719.2-201ENST00000606993 987 ntBASIC16.53■□□□□ 0.24
PER3P56645 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 AC010240.3-201ENST00000607688 395 ntBASIC16.53■□□□□ 0.24
PER3P56645 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.53■□□□□ 0.24
PER3P56645 AL773604.1-201ENST00000617417 272 ntBASIC16.53■□□□□ 0.24
PER3P56645 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PER3P56645 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PER3P56645 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PER3P56645 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PER3P56645 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PER3P56645 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PER3P56645 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PER3P56645 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.52■□□□□ 0.24
PER3P56645 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.52■□□□□ 0.24
PER3P56645 KRT18P58-201ENST00000527480 1120 ntBASIC16.52■□□□□ 0.24
PER3P56645 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.52■□□□□ 0.24
PER3P56645 AC104390.1-201ENST00000555663 520 ntBASIC16.52■□□□□ 0.24
PER3P56645 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.52■□□□□ 0.24
PER3P56645 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms