Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC008687.5-201ENST00000593746 558 ntBASIC17.48■□□□□ 0.39
CDH13P55290 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH13P55290 AL138966.2-201ENST00000621997 464 ntBASIC17.48■□□□□ 0.39
CDH13P55290 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH13P55290 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH13P55290 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH13P55290 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH13P55290 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
CDH13P55290 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDH13P55290 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 AP000523.1-201ENST00000398242 1049 ntBASIC17.47■□□□□ 0.39
CDH13P55290 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH13P55290 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH13P55290 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH13P55290 AC093827.2-201ENST00000512654 315 ntBASIC17.47■□□□□ 0.39
CDH13P55290 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH13P55290 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH13P55290 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CDH13P55290 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.47■□□□□ 0.39
CDH13P55290 AL023973.1-201ENST00000624619 620 ntBASIC17.47■□□□□ 0.39
CDH13P55290 AC133963.1-201ENST00000504166 1679 ntBASIC17.47■□□□□ 0.39
CDH13P55290 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CDH13P55290 AC009053.2-201ENST00000563701 2365 ntBASIC17.47■□□□□ 0.39
CDH13P55290 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDH13P55290 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 AC009949.1-201ENST00000623048 1830 ntBASIC17.47■□□□□ 0.39
CDH13P55290 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH13P55290 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH13P55290 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH13P55290 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH13P55290 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH13P55290 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH13P55290 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH13P55290 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH13P55290 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH13P55290 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH13P55290 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.46■□□□□ 0.39
CDH13P55290 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.46■□□□□ 0.39
CDH13P55290 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.46■□□□□ 0.39
CDH13P55290 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDH13P55290 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDH13P55290 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.46■□□□□ 0.39
CDH13P55290 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDH13P55290 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
CDH13P55290 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CDH13P55290 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH13P55290 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH13P55290 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.45■□□□□ 0.38
CDH13P55290 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.45■□□□□ 0.38
CDH13P55290 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms