Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF140P52738 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF140P52738 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF140P52738 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF140P52738 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
ZNF140P52738 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ZNF140P52738 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF140P52738 DRAXINP1-201ENST00000437611 948 ntBASIC17.75■□□□□ 0.43
ZNF140P52738 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.75■□□□□ 0.43
ZNF140P52738 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 AP002414.4-201ENST00000589764 1148 ntBASIC17.75■□□□□ 0.43
ZNF140P52738 AC069148.1-201ENST00000608741 768 ntBASIC17.75■□□□□ 0.43
ZNF140P52738 NPAP1P7-201ENST00000613027 823 ntBASIC17.75■□□□□ 0.43
ZNF140P52738 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.75■□□□□ 0.43
ZNF140P52738 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF140P52738 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
ZNF140P52738 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF140P52738 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF140P52738 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF140P52738 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF140P52738 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF140P52738 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ZNF140P52738 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ZNF140P52738 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF140P52738 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF140P52738 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.74■□□□□ 0.43
ZNF140P52738 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ZNF140P52738 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.74■□□□□ 0.43
ZNF140P52738 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF140P52738 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF140P52738 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.74■□□□□ 0.43
ZNF140P52738 MIR3180-1-201ENST00000580374 94 ntBASIC17.74■□□□□ 0.43
ZNF140P52738 MIR3180-3-201ENST00000584616 94 ntBASIC17.74■□□□□ 0.43
ZNF140P52738 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF140P52738 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
ZNF140P52738 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
ZNF140P52738 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF140P52738 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF140P52738 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ZNF140P52738 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
ZNF140P52738 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF140P52738 LETM1P2-201ENST00000597330 2178 ntBASIC17.73■□□□□ 0.43
ZNF140P52738 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 HLA-J-201ENST00000462773 1622 ntBASIC17.73■□□□□ 0.43
ZNF140P52738 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF140P52738 AC026471.1-201ENST00000564629 3026 ntBASIC17.73■□□□□ 0.43
ZNF140P52738 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ZNF140P52738 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 AC007967.3-201ENST00000434308 558 ntBASIC17.73■□□□□ 0.43
ZNF140P52738 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF140P52738 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ZNF140P52738 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF140P52738 LINC01451-201ENST00000623792 534 ntBASIC17.73■□□□□ 0.43
ZNF140P52738 AC233702.3-201ENST00000578656 1387 ntBASIC17.73■□□□□ 0.43
ZNF140P52738 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF140P52738 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ZNF140P52738 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ZNF140P52738 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF140P52738 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF140P52738 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF140P52738 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
ZNF140P52738 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ZNF140P52738 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF140P52738 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 AC005104.2-201ENST00000427818 678 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms