Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.5■□□□□ 0.39
CLCNKAP51800 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.5■□□□□ 0.39
CLCNKAP51800 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.5■□□□□ 0.39
CLCNKAP51800 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.5■□□□□ 0.39
CLCNKAP51800 AL591684.3-201ENST00000605187 298 ntBASIC17.5■□□□□ 0.39
CLCNKAP51800 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.5■□□□□ 0.39
CLCNKAP51800 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLCNKAP51800 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.5■□□□□ 0.39
CLCNKAP51800 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 INTS4P1-201ENST00000438455 1935 ntBASIC17.49■□□□□ 0.39
CLCNKAP51800 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCNKAP51800 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCNKAP51800 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCNKAP51800 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCNKAP51800 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.49■□□□□ 0.39
CLCNKAP51800 RCN1P2-201ENST00000398357 915 ntBASIC17.49■□□□□ 0.39
CLCNKAP51800 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
CLCNKAP51800 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLCNKAP51800 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.49■□□□□ 0.39
CLCNKAP51800 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 AC135050.7-201ENST00000624508 2218 ntBASIC17.49■□□□□ 0.39
CLCNKAP51800 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLCNKAP51800 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.49■□□□□ 0.39
CLCNKAP51800 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.49■□□□□ 0.39
CLCNKAP51800 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CLCNKAP51800 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCNKAP51800 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCNKAP51800 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCNKAP51800 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLCNKAP51800 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLCNKAP51800 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCNKAP51800 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCNKAP51800 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCNKAP51800 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCNKAP51800 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCNKAP51800 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 REXO1L6P-202ENST00000619970 1078 ntBASIC17.48■□□□□ 0.39
CLCNKAP51800 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCNKAP51800 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.48■□□□□ 0.39
CLCNKAP51800 KRT8P47-201ENST00000604727 1398 ntBASIC17.48■□□□□ 0.39
CLCNKAP51800 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCNKAP51800 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLCNKAP51800 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
CLCNKAP51800 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLCNKAP51800 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCNKAP51800 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCNKAP51800 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCNKAP51800 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.47■□□□□ 0.39
CLCNKAP51800 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms