Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 NKILA-202ENST00000614771 2598 ntBASIC17.09■□□□□ 0.33
HLCSP50747 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.09■□□□□ 0.33
HLCSP50747 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
HLCSP50747 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HLCSP50747 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.09■□□□□ 0.33
HLCSP50747 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.09■□□□□ 0.33
HLCSP50747 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.09■□□□□ 0.33
HLCSP50747 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
HLCSP50747 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.09■□□□□ 0.33
HLCSP50747 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HLCSP50747 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 PP12613-201ENST00000424958 2230 ntBASIC17.09■□□□□ 0.33
HLCSP50747 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLCSP50747 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HLCSP50747 AC022211.2-201ENST00000585075 2527 ntBASIC17.08■□□□□ 0.33
HLCSP50747 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HLCSP50747 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLCSP50747 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLCSP50747 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.08■□□□□ 0.33
HLCSP50747 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.08■□□□□ 0.33
HLCSP50747 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HLCSP50747 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.08■□□□□ 0.33
HLCSP50747 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HLCSP50747 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.08■□□□□ 0.32
HLCSP50747 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.08■□□□□ 0.32
HLCSP50747 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.08■□□□□ 0.32
HLCSP50747 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.08■□□□□ 0.32
HLCSP50747 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HLCSP50747 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.08■□□□□ 0.32
HLCSP50747 AC010240.3-201ENST00000607688 395 ntBASIC17.08■□□□□ 0.32
HLCSP50747 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.08■□□□□ 0.32
HLCSP50747 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
HLCSP50747 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.08■□□□□ 0.32
HLCSP50747 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HLCSP50747 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.08■□□□□ 0.32
HLCSP50747 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HLCSP50747 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HLCSP50747 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.07■□□□□ 0.32
HLCSP50747 HEIH-201ENST00000623091 1652 ntBASIC17.07■□□□□ 0.32
HLCSP50747 AC011676.5-201ENST00000624864 2660 ntBASIC17.07■□□□□ 0.32
HLCSP50747 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HLCSP50747 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.07■□□□□ 0.32
HLCSP50747 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.07■□□□□ 0.32
HLCSP50747 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.07■□□□□ 0.32
HLCSP50747 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HLCSP50747 SPDYE13P-201ENST00000445314 798 ntBASIC17.07■□□□□ 0.32
HLCSP50747 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.07■□□□□ 0.32
HLCSP50747 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.07■□□□□ 0.32
HLCSP50747 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.07■□□□□ 0.32
HLCSP50747 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.07■□□□□ 0.32
HLCSP50747 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
HLCSP50747 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.07■□□□□ 0.32
HLCSP50747 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLCSP50747 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.06■□□□□ 0.32
HLCSP50747 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLCSP50747 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.06■□□□□ 0.32
HLCSP50747 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLCSP50747 FLJ13224-201ENST00000313737 1514 ntBASIC17.06■□□□□ 0.32
HLCSP50747 REXO1L9P-201ENST00000604264 2108 ntBASIC17.06■□□□□ 0.32
HLCSP50747 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLCSP50747 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLCSP50747 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLCSP50747 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLCSP50747 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms