Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
IDH3AP50213 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3AP50213 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
IDH3AP50213 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3AP50213 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IDH3AP50213 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IDH3AP50213 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.35■□□□□ 0.37
IDH3AP50213 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IDH3AP50213 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.35■□□□□ 0.37
IDH3AP50213 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IDH3AP50213 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.35■□□□□ 0.37
IDH3AP50213 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.35■□□□□ 0.37
IDH3AP50213 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
IDH3AP50213 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
IDH3AP50213 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 AC060834.1-201ENST00000443027 2032 ntBASIC17.35■□□□□ 0.37
IDH3AP50213 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IDH3AP50213 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.35■□□□□ 0.37
IDH3AP50213 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
IDH3AP50213 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IDH3AP50213 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 PKD1P1-201ENST00000458669 6805 ntBASIC17.34■□□□□ 0.37
IDH3AP50213 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
IDH3AP50213 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.34■□□□□ 0.37
IDH3AP50213 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.34■□□□□ 0.37
IDH3AP50213 AL353719.1-201ENST00000566847 864 ntBASIC17.34■□□□□ 0.37
IDH3AP50213 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 AC116407.2-201ENST00000613639 860 ntBASIC17.34■□□□□ 0.37
IDH3AP50213 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
IDH3AP50213 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
IDH3AP50213 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
IDH3AP50213 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.33■□□□□ 0.37
IDH3AP50213 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
IDH3AP50213 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.33■□□□□ 0.37
IDH3AP50213 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms