Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC9A3P48764 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC9A3P48764 AC006116.8-202ENST00000587620 1550 ntBASIC16.4■□□□□ 0.22
SLC9A3P48764 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC9A3P48764 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC9A3P48764 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC9A3P48764 SEC1P-202ENST00000473944 940 ntBASIC16.4■□□□□ 0.22
SLC9A3P48764 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC9A3P48764 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC9A3P48764 NAPSB-206ENST00000562112 1266 ntBASIC16.4■□□□□ 0.22
SLC9A3P48764 NEK4P2-201ENST00000580004 1012 ntBASIC16.4■□□□□ 0.22
SLC9A3P48764 MIR4497-201ENST00000583208 89 ntBASIC16.4■□□□□ 0.22
SLC9A3P48764 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC9A3P48764 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC9A3P48764 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC9A3P48764 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC9A3P48764 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC9A3P48764 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC9A3P48764 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.39■□□□□ 0.22
SLC9A3P48764 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
SLC9A3P48764 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC9A3P48764 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SLC9A3P48764 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SLC9A3P48764 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC9A3P48764 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC9A3P48764 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC9A3P48764 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SLC9A3P48764 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC9A3P48764 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3P48764 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3P48764 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC9A3P48764 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.38■□□□□ 0.21
SLC9A3P48764 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3P48764 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3P48764 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SLC9A3P48764 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC9A3P48764 INGX-201ENST00000359239 846 ntBASIC16.38■□□□□ 0.21
SLC9A3P48764 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SLC9A3P48764 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC9A3P48764 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC9A3P48764 AP000523.1-201ENST00000398242 1049 ntBASIC16.38■□□□□ 0.21
SLC9A3P48764 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC9A3P48764 HMGA1P5-201ENST00000412453 271 ntBASIC16.38■□□□□ 0.21
SLC9A3P48764 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC9A3P48764 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC9A3P48764 AC009947.2-201ENST00000444014 672 ntBASIC16.38■□□□□ 0.21
SLC9A3P48764 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms