Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCNFP41002 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCNFP41002 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCNFP41002 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCNFP41002 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCNFP41002 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.97■□□□□ 0.47
CCNFP41002 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.97■□□□□ 0.47
CCNFP41002 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCNFP41002 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.97■□□□□ 0.47
CCNFP41002 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 AC046158.3-201ENST00000624947 2558 ntBASIC17.96■□□□□ 0.47
CCNFP41002 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.96■□□□□ 0.47
CCNFP41002 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCNFP41002 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCNFP41002 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCNFP41002 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.96■□□□□ 0.47
CCNFP41002 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCNFP41002 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.96■□□□□ 0.47
CCNFP41002 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.96■□□□□ 0.47
CCNFP41002 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.96■□□□□ 0.47
CCNFP41002 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.96■□□□□ 0.47
CCNFP41002 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCNFP41002 AL121761.2-201ENST00000598007 1648 ntBASIC17.96■□□□□ 0.47
CCNFP41002 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CCNFP41002 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCNFP41002 LINC00304-203ENST00000565008 1864 ntBASIC17.96■□□□□ 0.47
CCNFP41002 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.96■□□□□ 0.47
CCNFP41002 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCNFP41002 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCNFP41002 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCNFP41002 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCNFP41002 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNFP41002 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCNFP41002 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNFP41002 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNFP41002 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.95■□□□□ 0.46
CCNFP41002 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 RNF152P1-201ENST00000397754 604 ntBASIC17.95■□□□□ 0.46
CCNFP41002 AC117947.1-201ENST00000427448 529 ntBASIC17.95■□□□□ 0.46
CCNFP41002 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 AC011558.1-201ENST00000623459 338 ntBASIC17.95■□□□□ 0.46
CCNFP41002 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCNFP41002 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCNFP41002 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCNFP41002 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCNFP41002 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.94■□□□□ 0.46
CCNFP41002 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CCNFP41002 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCNFP41002 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 CROCCP2-202ENST00000412962 2773 ntBASIC17.94■□□□□ 0.46
CCNFP41002 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.94■□□□□ 0.46
CCNFP41002 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCNFP41002 AK4P3-201ENST00000418260 669 ntBASIC17.94■□□□□ 0.46
CCNFP41002 TMPOP1-202ENST00000424642 1267 ntBASIC17.94■□□□□ 0.46
CCNFP41002 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms