Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC080080.1-201ENST00000625121 2420 ntBASIC17.01■□□□□ 0.31
KRT20P35900 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT20P35900 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KRT20P35900 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT20P35900 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 AC117947.1-201ENST00000427448 529 ntBASIC17.01■□□□□ 0.31
KRT20P35900 HOMER2P1-201ENST00000455653 964 ntBASIC17.01■□□□□ 0.31
KRT20P35900 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KRT20P35900 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT20P35900 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT20P35900 MIR3917-201ENST00000580971 93 ntBASIC17.01■□□□□ 0.31
KRT20P35900 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 AC011558.1-201ENST00000623459 338 ntBASIC17.01■□□□□ 0.31
KRT20P35900 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
KRT20P35900 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT20P35900 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT20P35900 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
KRT20P35900 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT20P35900 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17■□□□□ 0.31
KRT20P35900 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17■□□□□ 0.31
KRT20P35900 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
KRT20P35900 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17■□□□□ 0.31
KRT20P35900 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17■□□□□ 0.31
KRT20P35900 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17■□□□□ 0.31
KRT20P35900 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17■□□□□ 0.31
KRT20P35900 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17■□□□□ 0.31
KRT20P35900 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
KRT20P35900 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 TSPY5P-201ENST00000426936 936 ntBASIC17■□□□□ 0.31
KRT20P35900 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17■□□□□ 0.31
KRT20P35900 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17■□□□□ 0.31
KRT20P35900 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17■□□□□ 0.31
KRT20P35900 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17■□□□□ 0.31
KRT20P35900 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
KRT20P35900 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17■□□□□ 0.31
KRT20P35900 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KRT20P35900 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
KRT20P35900 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT20P35900 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KRT20P35900 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
KRT20P35900 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
KRT20P35900 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
KRT20P35900 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
KRT20P35900 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KRT20P35900 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT20P35900 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRT20P35900 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KRT20P35900 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.99■□□□□ 0.31
KRT20P35900 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT20P35900 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.99■□□□□ 0.31
KRT20P35900 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.99■□□□□ 0.31
KRT20P35900 AL441883.1-201ENST00000566170 1045 ntBASIC16.99■□□□□ 0.31
KRT20P35900 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT20P35900 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT20P35900 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
KRT20P35900 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
KRT20P35900 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT20P35900 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms