Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 AGGF1P2-201ENST00000426656 2106 ntBASIC16.04■□□□□ 0.16
SOX6P35712 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX6P35712 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SOX6P35712 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX6P35712 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.04■□□□□ 0.16
SOX6P35712 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.04■□□□□ 0.16
SOX6P35712 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX6P35712 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX6P35712 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX6P35712 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.04■□□□□ 0.16
SOX6P35712 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.04■□□□□ 0.16
SOX6P35712 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 AL596257.1-201ENST00000641463 2694 ntBASIC16.04■□□□□ 0.16
SOX6P35712 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SOX6P35712 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SOX6P35712 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.04■□□□□ 0.16
SOX6P35712 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SOX6P35712 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SOX6P35712 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOX6P35712 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 AC126755.1-201ENST00000525846 6405 ntBASIC16.03■□□□□ 0.16
SOX6P35712 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SOX6P35712 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.03■□□□□ 0.16
SOX6P35712 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
SOX6P35712 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.03■□□□□ 0.16
SOX6P35712 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
SOX6P35712 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
SOX6P35712 PCDHA1-201ENST00000378133 2726 ntBASIC16.03■□□□□ 0.16
SOX6P35712 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX6P35712 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.03■□□□□ 0.16
SOX6P35712 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SOX6P35712 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX6P35712 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SOX6P35712 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SOX6P35712 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SOX6P35712 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SOX6P35712 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.03■□□□□ 0.16
SOX6P35712 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.03■□□□□ 0.16
SOX6P35712 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX6P35712 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
SOX6P35712 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SOX6P35712 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX6P35712 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SOX6P35712 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.02■□□□□ 0.16
SOX6P35712 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX6P35712 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SOX6P35712 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SOX6P35712 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms