Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RORAP35398 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.95■□□□□ 0.3
RORAP35398 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RORAP35398 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RORAP35398 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 PHGDH-209ENST00000641074 1780 ntBASIC16.94■□□□□ 0.3
RORAP35398 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RORAP35398 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.94■□□□□ 0.3
RORAP35398 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
RORAP35398 RBM17P3-201ENST00000417687 1192 ntBASIC16.94■□□□□ 0.3
RORAP35398 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.94■□□□□ 0.3
RORAP35398 RNA5SP419-201ENST00000515908 135 ntBASIC16.94■□□□□ 0.3
RORAP35398 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.94■□□□□ 0.3
RORAP35398 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.94■□□□□ 0.3
RORAP35398 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.94■□□□□ 0.3
RORAP35398 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 AL355877.3-201ENST00000622820 899 ntBASIC16.94■□□□□ 0.3
RORAP35398 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.94■□□□□ 0.3
RORAP35398 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.94■□□□□ 0.3
RORAP35398 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.94■□□□□ 0.3
RORAP35398 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RORAP35398 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RORAP35398 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RORAP35398 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
RORAP35398 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RORAP35398 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 FAM197Y8-203ENST00000450145 560 ntBASIC16.93■□□□□ 0.3
RORAP35398 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RORAP35398 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.93■□□□□ 0.3
RORAP35398 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.93■□□□□ 0.3
RORAP35398 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 AP001269.4-201ENST00000609611 512 ntBASIC16.93■□□□□ 0.3
RORAP35398 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.93■□□□□ 0.3
RORAP35398 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RORAP35398 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
RORAP35398 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.93■□□□□ 0.3
RORAP35398 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RORAP35398 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RORAP35398 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.92■□□□□ 0.3
RORAP35398 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.92■□□□□ 0.3
RORAP35398 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RORAP35398 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RORAP35398 KRT18P67-201ENST00000432816 1264 ntBASIC16.92■□□□□ 0.3
RORAP35398 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.92■□□□□ 0.3
RORAP35398 FGFR3P6-201ENST00000457012 610 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms