Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.94■■□□□ 1.42
USP6P35125 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.94■■□□□ 1.42
USP6P35125 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
USP6P35125 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
USP6P35125 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.93■■□□□ 1.42
USP6P35125 AL078644.1-201ENST00000609881 752 ntBASIC23.93■■□□□ 1.42
USP6P35125 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.93■■□□□ 1.42
USP6P35125 C20orf181-201ENST00000623918 480 ntBASIC23.93■■□□□ 1.42
USP6P35125 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
USP6P35125 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.93■■□□□ 1.42
USP6P35125 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.93■■□□□ 1.42
USP6P35125 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
USP6P35125 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
USP6P35125 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
USP6P35125 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
USP6P35125 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.93■■□□□ 1.42
USP6P35125 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC23.93■■□□□ 1.42
USP6P35125 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.93■■□□□ 1.42
USP6P35125 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.93■■□□□ 1.42
USP6P35125 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC23.92■■□□□ 1.42
USP6P35125 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.92■■□□□ 1.42
USP6P35125 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.92■■□□□ 1.42
USP6P35125 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
USP6P35125 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
USP6P35125 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
USP6P35125 AP002414.1-201ENST00000391405 1147 ntBASIC23.92■■□□□ 1.42
USP6P35125 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
USP6P35125 MRPL20P1-201ENST00000400819 433 ntBASIC23.92■■□□□ 1.42
USP6P35125 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.92■■□□□ 1.42
USP6P35125 PDPK2P-202ENST00000562415 1191 ntBASIC23.92■■□□□ 1.42
USP6P35125 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.92■■□□□ 1.42
USP6P35125 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.92■■□□□ 1.42
USP6P35125 AC116407.2-201ENST00000613639 860 ntBASIC23.92■■□□□ 1.42
USP6P35125 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6P35125 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
USP6P35125 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.91■■□□□ 1.42
USP6P35125 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
USP6P35125 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USP6P35125 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USP6P35125 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.91■■□□□ 1.42
USP6P35125 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
USP6P35125 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6P35125 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USP6P35125 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.91■■□□□ 1.42
USP6P35125 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.91■■□□□ 1.42
USP6P35125 METTL21AP1-201ENST00000438852 635 ntBASIC23.91■■□□□ 1.42
USP6P35125 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.91■■□□□ 1.42
USP6P35125 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC23.91■■□□□ 1.42
USP6P35125 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.91■■□□□ 1.42
USP6P35125 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6P35125 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
USP6P35125 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC23.9■■□□□ 1.42
USP6P35125 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
USP6P35125 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6P35125 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6P35125 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
USP6P35125 PTCHD3P3-201ENST00000403073 906 ntBASIC23.9■■□□□ 1.42
USP6P35125 AC254562.1-201ENST00000417586 456 ntBASIC23.9■■□□□ 1.42
USP6P35125 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.9■■□□□ 1.42
USP6P35125 MKNK2P1-201ENST00000437526 628 ntBASIC23.9■■□□□ 1.42
USP6P35125 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC23.9■■□□□ 1.42
USP6P35125 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.9■■□□□ 1.42
USP6P35125 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.9■■□□□ 1.42
USP6P35125 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.9■■□□□ 1.42
USP6P35125 AL596442.2-201ENST00000610240 980 ntBASIC23.9■■□□□ 1.42
USP6P35125 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
USP6P35125 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6P35125 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.9■■□□□ 1.42
USP6P35125 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USP6P35125 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.9■■□□□ 1.42
USP6P35125 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
USP6P35125 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.89■■□□□ 1.42
USP6P35125 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
USP6P35125 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.42
USP6P35125 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
USP6P35125 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USP6P35125 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.89■■□□□ 1.42
USP6P35125 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms