Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HOXA6P31267 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA6P31267 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.39
HOXA6P31267 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA6P31267 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXA6P31267 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXA6P31267 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXA6P31267 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HOXA6P31267 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA6P31267 PCDHAC2-203ENST00000615316 3011 ntBASIC17.51■□□□□ 0.39
HOXA6P31267 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 PAWRP1-201ENST00000451083 565 ntBASIC17.51■□□□□ 0.39
HOXA6P31267 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HOXA6P31267 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
HOXA6P31267 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.51■□□□□ 0.39
HOXA6P31267 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.51■□□□□ 0.39
HOXA6P31267 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXA6P31267 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HOXA6P31267 AC005332.7-201ENST00000614046 2005 ntBASIC17.51■□□□□ 0.39
HOXA6P31267 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA6P31267 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
HOXA6P31267 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA6P31267 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXA6P31267 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXA6P31267 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA6P31267 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA6P31267 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA6P31267 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA6P31267 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA6P31267 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXA6P31267 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HOXA6P31267 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA6P31267 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA6P31267 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXA6P31267 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXA6P31267 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA6P31267 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA6P31267 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXA6P31267 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXA6P31267 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXA6P31267 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXA6P31267 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXA6P31267 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HOXA6P31267 AC093512.1-201ENST00000617969 520 ntBASIC17.5■□□□□ 0.39
HOXA6P31267 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HOXA6P31267 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA6P31267 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HOXA6P31267 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA6P31267 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 AC005082.1-201ENST00000413042 2259 ntBASIC17.49■□□□□ 0.39
HOXA6P31267 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HOXA6P31267 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA6P31267 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.49■□□□□ 0.39
HOXA6P31267 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA6P31267 STK19B-204ENST00000512515 211 ntBASIC17.49■□□□□ 0.39
HOXA6P31267 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA6P31267 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA6P31267 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
HOXA6P31267 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.49■□□□□ 0.39
HOXA6P31267 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HOXA6P31267 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA6P31267 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA6P31267 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.48■□□□□ 0.39
HOXA6P31267 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
HOXA6P31267 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA6P31267 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.48■□□□□ 0.39
HOXA6P31267 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA6P31267 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HOXA6P31267 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms