Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A5P29400 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL4A5P29400 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A5P29400 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A5P29400 MIR661-201ENST00000384842 89 ntBASIC21.24■□□□□ 0.99
COL4A5P29400 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A5P29400 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.24■□□□□ 0.99
COL4A5P29400 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A5P29400 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.24■□□□□ 0.99
COL4A5P29400 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A5P29400 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A5P29400 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A5P29400 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.24■□□□□ 0.99
COL4A5P29400 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A5P29400 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 AC097637.2-201ENST00000624096 1997 ntBASIC21.24■□□□□ 0.99
COL4A5P29400 AC004449.1-201ENST00000564240 433 ntBASIC21.24■□□□□ 0.99
COL4A5P29400 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A5P29400 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.24■□□□□ 0.99
COL4A5P29400 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A5P29400 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.24■□□□□ 0.99
COL4A5P29400 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL4A5P29400 LINC00982-205ENST00000420957 435 ntBASIC21.23■□□□□ 0.99
COL4A5P29400 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.23■□□□□ 0.99
COL4A5P29400 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.23■□□□□ 0.99
COL4A5P29400 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.23■□□□□ 0.99
COL4A5P29400 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.23■□□□□ 0.99
COL4A5P29400 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.23■□□□□ 0.99
COL4A5P29400 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
COL4A5P29400 LINC00628-201ENST00000628516 1289 ntBASIC21.23■□□□□ 0.99
COL4A5P29400 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.23■□□□□ 0.99
COL4A5P29400 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.23■□□□□ 0.99
COL4A5P29400 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.23■□□□□ 0.99
COL4A5P29400 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.23■□□□□ 0.99
COL4A5P29400 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL4A5P29400 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
COL4A5P29400 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.23■□□□□ 0.99
COL4A5P29400 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.22■□□□□ 0.99
COL4A5P29400 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A5P29400 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A5P29400 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A5P29400 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A5P29400 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL4A5P29400 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A5P29400 STK19B-204ENST00000512515 211 ntBASIC21.22■□□□□ 0.99
COL4A5P29400 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.22■□□□□ 0.99
COL4A5P29400 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.22■□□□□ 0.99
COL4A5P29400 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A5P29400 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.22■□□□□ 0.99
COL4A5P29400 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL4A5P29400 AC099522.2-201ENST00000607001 744 ntBASIC21.22■□□□□ 0.99
COL4A5P29400 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A5P29400 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A5P29400 AL031598.1-201ENST00000561511 1773 ntBASIC21.22■□□□□ 0.99
COL4A5P29400 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A5P29400 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A5P29400 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL4A5P29400 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL4A5P29400 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.22■□□□□ 0.99
COL4A5P29400 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.21■□□□□ 0.99
COL4A5P29400 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.21■□□□□ 0.99
COL4A5P29400 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
COL4A5P29400 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 MIR4745-201ENST00000577608 62 ntBASIC21.21■□□□□ 0.99
COL4A5P29400 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.21■□□□□ 0.99
COL4A5P29400 ACTL9-202ENST00000612068 1252 ntBASIC21.21■□□□□ 0.99
COL4A5P29400 GGTLC5P-201ENST00000617623 998 ntBASIC21.21■□□□□ 0.99
COL4A5P29400 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL4A5P29400 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.21■□□□□ 0.99
COL4A5P29400 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL4A5P29400 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.21■□□□□ 0.99
COL4A5P29400 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.21■□□□□ 0.99
COL4A5P29400 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.21■□□□□ 0.99
COL4A5P29400 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL4A5P29400 AL627223.1-201ENST00000416693 442 ntBASIC21.21■□□□□ 0.99
COL4A5P29400 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.21■□□□□ 0.99
COL4A5P29400 CXCL1P1-201ENST00000502804 216 ntBASIC21.21■□□□□ 0.99
COL4A5P29400 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms