Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC23.17■■□□□ 1.3
RXRBP28702 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.17■■□□□ 1.3
RXRBP28702 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.17■■□□□ 1.3
RXRBP28702 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RXRBP28702 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 AKAP8P1-201ENST00000434743 1349 ntBASIC23.16■■□□□ 1.3
RXRBP28702 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC23.16■■□□□ 1.3
RXRBP28702 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RXRBP28702 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.16■■□□□ 1.3
RXRBP28702 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC23.16■■□□□ 1.3
RXRBP28702 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 IGHV3-62-201ENST00000520057 340 ntBASIC23.16■■□□□ 1.3
RXRBP28702 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RXRBP28702 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RXRBP28702 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RXRBP28702 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.15■■□□□ 1.3
RXRBP28702 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC23.15■■□□□ 1.3
RXRBP28702 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RXRBP28702 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC23.15■■□□□ 1.3
RXRBP28702 HAUS4P1-201ENST00000406739 1145 ntBASIC23.15■■□□□ 1.3
RXRBP28702 HCG4-201ENST00000418983 998 ntBASIC23.15■■□□□ 1.3
RXRBP28702 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC23.15■■□□□ 1.3
RXRBP28702 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 SPTSSB-204ENST00000617024 1292 ntBASIC23.15■■□□□ 1.3
RXRBP28702 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC23.15■■□□□ 1.3
RXRBP28702 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RXRBP28702 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RXRBP28702 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
RXRBP28702 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC23.14■■□□□ 1.3
RXRBP28702 UXT-AS1-201ENST00000590504 1525 ntBASIC23.14■■□□□ 1.3
RXRBP28702 MXI1-205ENST00000393134 889 ntTSL 2 BASIC23.14■■□□□ 1.29
RXRBP28702 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RXRBP28702 AC112492.5-201ENST00000421897 457 ntBASIC23.14■■□□□ 1.29
RXRBP28702 KRT8P23-201ENST00000560090 1207 ntBASIC23.14■■□□□ 1.29
RXRBP28702 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
RXRBP28702 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.14■■□□□ 1.29
RXRBP28702 AL590560.3-201ENST00000623350 461 ntBASIC23.14■■□□□ 1.29
RXRBP28702 AL033527.4-201ENST00000641026 673 ntBASIC23.14■■□□□ 1.29
RXRBP28702 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RXRBP28702 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RXRBP28702 AC022144.1-201ENST00000602255 1580 ntBASIC23.14■■□□□ 1.29
RXRBP28702 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RXRBP28702 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RXRBP28702 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RXRBP28702 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
RXRBP28702 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
RXRBP28702 INE1-201ENST00000456273 945 ntBASIC23.13■■□□□ 1.29
RXRBP28702 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 RARRES2P8-201ENST00000566335 367 ntBASIC23.13■■□□□ 1.29
RXRBP28702 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RXRBP28702 AC100757.3-201ENST00000622361 1406 ntBASIC23.13■■□□□ 1.29
RXRBP28702 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.13■■□□□ 1.29
RXRBP28702 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RXRBP28702 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RXRBP28702 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC23.13■■□□□ 1.29
RXRBP28702 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.12■■□□□ 1.29
RXRBP28702 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RXRBP28702 TSSK5P-201ENST00000423978 907 ntBASIC23.12■■□□□ 1.29
RXRBP28702 AC022210.1-201ENST00000449856 793 ntBASIC23.12■■□□□ 1.29
RXRBP28702 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
RXRBP28702 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC23.12■■□□□ 1.29
RXRBP28702 KRT17P8-201ENST00000540749 863 ntBASIC23.12■■□□□ 1.29
RXRBP28702 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC23.12■■□□□ 1.29
RXRBP28702 LINC01225-203ENST00000563550 1244 ntBASIC23.12■■□□□ 1.29
RXRBP28702 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.12■■□□□ 1.29
RXRBP28702 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms