Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
HTR1EP28566 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1EP28566 AL671277.2-201ENST00000458060 996 ntBASIC17.12■□□□□ 0.33
HTR1EP28566 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1EP28566 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.12■□□□□ 0.33
HTR1EP28566 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HTR1EP28566 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1EP28566 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.12■□□□□ 0.33
HTR1EP28566 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1EP28566 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1EP28566 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1EP28566 AL355312.1-201ENST00000407115 2176 ntBASIC17.12■□□□□ 0.33
HTR1EP28566 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1EP28566 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 AC036111.1-201ENST00000533973 1582 ntBASIC17.11■□□□□ 0.33
HTR1EP28566 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1EP28566 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.11■□□□□ 0.33
HTR1EP28566 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1EP28566 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1EP28566 TSPY17P-201ENST00000450329 467 ntBASIC17.11■□□□□ 0.33
HTR1EP28566 AL359075.1-203ENST00000462729 1002 ntBASIC17.11■□□□□ 0.33
HTR1EP28566 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1EP28566 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1EP28566 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1EP28566 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.11■□□□□ 0.33
HTR1EP28566 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1EP28566 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.11■□□□□ 0.33
HTR1EP28566 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HTR1EP28566 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.11■□□□□ 0.33
HTR1EP28566 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HTR1EP28566 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HTR1EP28566 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HTR1EP28566 AC092338.2-201ENST00000568827 1415 ntBASIC17.11■□□□□ 0.33
HTR1EP28566 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HTR1EP28566 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HTR1EP28566 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1EP28566 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1EP28566 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HTR1EP28566 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HTR1EP28566 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
HTR1EP28566 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1EP28566 MIR3180-5-201ENST00000583743 153 ntBASIC17.1■□□□□ 0.33
HTR1EP28566 CLEC4GP1-201ENST00000596555 870 ntBASIC17.1■□□□□ 0.33
HTR1EP28566 AL691432.3-201ENST00000621860 400 ntBASIC17.1■□□□□ 0.33
HTR1EP28566 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.1■□□□□ 0.33
HTR1EP28566 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HTR1EP28566 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HTR1EP28566 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.1■□□□□ 0.33
HTR1EP28566 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HTR1EP28566 NKILA-202ENST00000614771 2598 ntBASIC17.1■□□□□ 0.33
HTR1EP28566 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HTR1EP28566 LINC01126-201ENST00000623515 1646 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms