Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NR4A1P22736 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NR4A1P22736 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR4A1P22736 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR4A1P22736 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR4A1P22736 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.62■□□□□ 0.25
NR4A1P22736 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.62■□□□□ 0.25
NR4A1P22736 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NR4A1P22736 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.62■□□□□ 0.25
NR4A1P22736 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 HYMAI-201ENST00000635591 3347 ntBASIC16.62■□□□□ 0.25
NR4A1P22736 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NR4A1P22736 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.62■□□□□ 0.25
NR4A1P22736 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.62■□□□□ 0.25
NR4A1P22736 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NR4A1P22736 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NR4A1P22736 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
NR4A1P22736 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.62■□□□□ 0.25
NR4A1P22736 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.62■□□□□ 0.25
NR4A1P22736 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.62■□□□□ 0.25
NR4A1P22736 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NR4A1P22736 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.62■□□□□ 0.25
NR4A1P22736 DGCR10-201ENST00000609839 495 ntBASIC16.62■□□□□ 0.25
NR4A1P22736 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.62■□□□□ 0.25
NR4A1P22736 AC011298.2-201ENST00000617989 482 ntBASIC16.62■□□□□ 0.25
NR4A1P22736 AC073912.3-201ENST00000624414 853 ntBASIC16.62■□□□□ 0.25
NR4A1P22736 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.62■□□□□ 0.25
NR4A1P22736 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NR4A1P22736 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR4A1P22736 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NR4A1P22736 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.61■□□□□ 0.25
NR4A1P22736 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.61■□□□□ 0.25
NR4A1P22736 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.61■□□□□ 0.25
NR4A1P22736 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 AC091390.4-202ENST00000476426 537 ntBASIC16.61■□□□□ 0.25
NR4A1P22736 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.61■□□□□ 0.25
NR4A1P22736 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.61■□□□□ 0.25
NR4A1P22736 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.61■□□□□ 0.25
NR4A1P22736 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.61■□□□□ 0.25
NR4A1P22736 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.61■□□□□ 0.25
NR4A1P22736 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NR4A1P22736 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NR4A1P22736 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
NR4A1P22736 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.61■□□□□ 0.25
NR4A1P22736 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NR4A1P22736 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
NR4A1P22736 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 CROCCP2-202ENST00000412962 2773 ntBASIC16.6■□□□□ 0.25
NR4A1P22736 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NR4A1P22736 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
NR4A1P22736 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR4A1P22736 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms