Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.61■□□□□ 0.57
TCF4P15884 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TCF4P15884 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.61■□□□□ 0.57
TCF4P15884 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.61■□□□□ 0.57
TCF4P15884 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.61■□□□□ 0.57
TCF4P15884 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
TCF4P15884 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.61■□□□□ 0.57
TCF4P15884 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.61■□□□□ 0.57
TCF4P15884 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.61■□□□□ 0.57
TCF4P15884 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TCF4P15884 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TCF4P15884 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCF4P15884 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TCF4P15884 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
TCF4P15884 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 AC133963.1-201ENST00000504166 1679 ntBASIC18.6■□□□□ 0.57
TCF4P15884 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TCF4P15884 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TCF4P15884 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TCF4P15884 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.6■□□□□ 0.57
TCF4P15884 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.6■□□□□ 0.57
TCF4P15884 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.6■□□□□ 0.57
TCF4P15884 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TCF4P15884 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TCF4P15884 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.6■□□□□ 0.57
TCF4P15884 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCF4P15884 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TCF4P15884 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TCF4P15884 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TCF4P15884 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TCF4P15884 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TCF4P15884 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 AL645929.1-201ENST00000420084 975 ntBASIC18.59■□□□□ 0.57
TCF4P15884 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.59■□□□□ 0.57
TCF4P15884 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.59■□□□□ 0.57
TCF4P15884 MTCL1P1-201ENST00000446207 792 ntBASIC18.59■□□□□ 0.57
TCF4P15884 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.59■□□□□ 0.57
TCF4P15884 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.59■□□□□ 0.57
TCF4P15884 SIRPAP1-201ENST00000448467 1770 ntBASIC18.59■□□□□ 0.57
TCF4P15884 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TCF4P15884 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TCF4P15884 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.59■□□□□ 0.57
TCF4P15884 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
TCF4P15884 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.59■□□□□ 0.57
TCF4P15884 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCF4P15884 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TCF4P15884 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.58■□□□□ 0.57
TCF4P15884 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
TCF4P15884 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.58■□□□□ 0.57
TCF4P15884 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCF4P15884 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TCF4P15884 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.58■□□□□ 0.57
TCF4P15884 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCF4P15884 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TCF4P15884 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.58■□□□□ 0.56
TCF4P15884 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TCF4P15884 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TCF4P15884 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.58■□□□□ 0.56
TCF4P15884 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.58■□□□□ 0.56
TCF4P15884 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.58■□□□□ 0.56
TCF4P15884 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.58■□□□□ 0.56
TCF4P15884 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TCF4P15884 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCF4P15884 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TCF4P15884 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TCF4P15884 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms